Protein ZmTHX17
ZmTHX17 is a protein in the Trihelix family.
Information
TF Name: ZmTHX17
Species: Maize
TF Family: Trihelix
Gene Name(Synonym): THX17
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmTHX17

ZmTHX17 is a protein in the Trihelix family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF13837Trihelix
Zm00001eb157080_T003
Zm00001eb157080_T001
Zm00001eb157080_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d043902DAPseq no logo sequence fimo position
Zm00001d043902DAPseq no logo sequence fimo position
Zm00001d043902ChIPseq no logo sequence fimo position
Zm00001d043902PChIPseq no logo sequence fimo position

Interactions where ZmTHX17 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTHX17 is the target  
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There are 141 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb157080_T003 from maize genome v5

Amino Acid Sequence
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MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF13837
Trihelix
PF13837
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Nucleotide Sequence
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ACGTGCCGCGTCGCGGTCGTCACGG...

GRMZM2G080583_T01 from maize genome v3


Related TFome: pUT5900

Amino Acid Sequence
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MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

Nucleotide Sequence
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TCCGTCCCAGCGCCAACTGCTAATC...

Zm00001d043902_T001 from maize genome v4

Amino Acid Sequence
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MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

Nucleotide Sequence
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GCGATGGACGGGAAGTTGCCGCCGC...

Zm00001eb157080_T001 from maize genome v5

Amino Acid Sequence
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MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

Nucleotide Sequence
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GAGGAGAAGGATGGAGCAATGAAGC...

Zm00001eb157080_T002 from maize genome v5

Amino Acid Sequence
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MDGKLPPPNPNLPYREDCWSEGETAALVDAWGSRYLDLNRGSLRQPQWREVADAVNSRPGASARRRPPRTDIQCKNRVDT
LKKKYKAERARGGPSQWNFYAQLDLLVGPTLTGIKKPSPPRAALPVFRRRLTPPRSPSPQSPPPLPVALPLHNYRRGSDL
PSANLIHKAAAAAAAAAAESDSEDGYNNNDYDDDEGSQQSPSRSVSSGFGGGGGGAPPAVGSKRKMSSGSGGFGELARAI
ETFADMYERMEAAKQQHAEEMERQRIKFLKDLELKRMQAFVDMQLQLARTKHARKGDASSDTLMSLAALPFLSSPAYL

Nucleotide Sequence
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ATCTCTTTCGGCGCGGACGCCTGAC...


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